The amount of Biological data coming out of laboratories, since the completion of Human Genome Project (HGP)  has grown into a deluge that demands high speed computing power. Bioinformatics provides the means to process the vast genetic data from the HGP and build an understanding of diseases. This in turn would lead to the design of drugs and gene based therapies for treatment of complex diseases that till now did not have a cure. Basically this is the deciphering of the code and working out the structure of life's assembly. 

This calls on for the following skills like Structural Biology & Modelling,  Mathematical Optimisation, Computer Graphics, Linear Algebra and matrices, Application development on various platforms and languages.

Our Bioinformatics efforts are focused on creating high quality databases and analysis tools. All databases are created by manually curating information from research articles, patents, and publications.

Skills

Research Areas

Infrastructure

Skills

We have a dedicated team of Bioinformaticians with concentrated expertise in proteomics, genomics, data mining, and database development to ensure that the growing body of information from molecular biology and genome research is available to the scientific community in ways that promote scientific progress.

The major skill sets of the team at the collaborating centres:

Interaction Networks
Signal Transduction
Keyword Indexing
Expression Profile Curation
Drug-Protein Interaction
Biomarkers
Sequence Analysis
Metabolomics
Mutation And Knock-Out Information
Transcription Factor Database
RNAi Database

The idea is to help scientific community develop and utilize efficient high quality proteomics databases. We want to be strongly involved in research projects in bioinformatics and computational molecular biology. 

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Research Areas

Our services extend from creating databases for drug discovery, to various areas of Biotechnology including Crop science, Nutraceuticals, Biochemical reactions and Enzymes. We serve our customers and create manually curated databases, application and analysis tools and annotate data elements from existing data-sets.

The databases are validated to ensure high scientific quality and accuracy. The products are useful in drug discovery, especially in target selection, target validation, toxicogenomics and biomarker validation. The database products have the software user interface with analytical capabilities.

We also carry out Digitization of Research Data and related gamut of activities including Data Collection, Literature Surveys for any scientific research viz.

Evolution and Phylogeny 
Genomics 
Transcriptomics 
Proteomics 
Pathways 
Networks and Systems Biology 
Structural Bio-informatics 
Neuro-informatics Bio-Ontologies 
Biomedical Text Mining 
Biological Data Modeling and Integration 
Agriculture and Drug Discovery

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Infrastructure

Servers

 Make

Number

 

 

 

Wipro

Processor: Xeon@3.0 Ghz; RAM: 1 GB; HDD: 120 GB; OS:RHL9;  12/24GB-DAT drive;

1

 

 

 

HCL
(AMD Opteron 64 BIT)

Processor: AMD 8131/8111 Motherboard (Dual Processor Capable); RAM: 1 GB; HDD: 100 GB; OS:Windows 2003 Server;    12/24GB-DAT drive;

1

 

 

 

Specialized Workstations

 

 

 

 

Silicon Graphics (Onyx3 Infinite Performance Fuel)

Processor: 800Mhz. MIPS R16000 (IP35) with MIPS R16000 FPU; RAM: 1 GB;  HDD:176 GB; OS: IRIX64 Release 6.5; Graphics: V10)

1

 

 

 

HCL
(DSM Modeling Server)

Processor: Pentium IV@2.8 Ghz.; RAM: 512+128; HDD:40 GB; OS:Windows XP; CD-RW; DVD-RW

1

 

 

 

HCL
(Workstation Cluster)

Beowulf type Cluster (Linux based)

1 Master +
5 Slaves

 

 

 

Workstations

 

 

 

 

HCL
(Infinity Pro BL)

Processor: Pentium IV@3.0 Ghz.; RAM: 512 MB; HDD:80 GB SATA; Combo: 16x10x40 CD R/W; Monitor:17'' CRT; Mouse: Optical; OS:Dual (RHL9 & Windows XP)

10

 

 

 

HCL
(Infinity)

Processor: Pentium IV@2.8 Ghz.; RAM: 256+128; HDD:40 GB; OS:Dual (RHL9 & Windows XP); CD-RW (TFT-LCD Monitor)

5

 

 

 

HCL
(Infinity Pro)

Processor: Pentium IV@2.8 Ghz.; RAM: 512+128; HDD:40 GB; OS:Dual (RHL9 & Windows XP); CD-RW

11

 

 

 

IBM

Processor: Pentium IV@1.6 Ghz.; RAM: 128; HDD: 40 GB; OS: Dual (RHL9 & Windows XP); CD-RW

6

 

 

 

HP (EPC)

Processor: Pentium III@833 Mhz.; RAM: 128 MB; HDD:20 GB; OS: Dual (RHL9 & Windows XP)

3

 

 

 

HP-Vectra

Processor: Pentium III@833 Mhz; RAM:128 MB; HDD:30 GB; OS:RHL9

1

 

 

 

Calysys

Processor: Pentium III@550 Mhz.; RAM: 128 MB; HDD:10 GB; OS: Free BSD Unix

1

 

 

 

Accel

Processor: Pentium II@350 Mhz.; RAM: 128 MB; HDD:4 GB; OS: Windows 98

8

 

 

 

 

 

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